Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCTSQLAPVAPCLDYVQGNGKTPSSDCCKGLSSLVTTS-PVCLCQLSEGKLNLSALGVTVDMKRALSLPTV-CKIKGADRSRCAGKLSIP
1HYP Chain:? ((6-80))
-PSCP----DLSICLN-ILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLR------ALGI-LNLNRNLQLILNSCGRSYPSNATCPRT----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30091 for 462 contacts (-65.1/contact) +
2D Compatibility (PS) -7427 + (NN) -643 + (LL) 1048
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -44513.0 ( -96.35 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: