Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--APSAAECKEERRLAINACKPVVYGKDPSPACCERAR-VTHIE---CVCPVITPKLAALIDVNRAVRLIEG-CGRKVPRHYKCGSITTP
1HYP Chain:? ((6-80))
PSCPDLSICLN----ILGG------SLGTVDDCCALIGGLGDIEAIVCLCIQL-RAL-GILNLNRNLQLILNSCGRSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30499 for 412 contacts (-74.0/contact) +
2D Compatibility (PS) -6846 + (NN) -1520 + (LL) 1096
1D Compatibility (HY) -6800 + (ID) 900
Total energy: -45469.0 ( -110.36 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: