Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATVPCGTVDMKAAACVGYATGK----QPK-----PSPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFA---G---------VQ---------DRLLSQIPTACNIKVGFPVSLNTNCET
1B1U Chain:A ((16-109))
----------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26038 for 406 contacts (-64.1/contact) +
2D Compatibility (PS) -6100 + (NN) 1412 + (LL) 1576
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -31650.0 ( -77.96 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: