Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DLSCGQVLSTLYPCLGYIRN----PGASV-----PAPCCNGIRIVNDEAKNTSDRQSVCRCLKSTI-VL----P---G---IN----------LDALANL--PTNCGVNLPYKITPDIDCNKIPY
1BEA Chain:A ((15-110))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60492 for 389 contacts (-155.5/contact) +
2D Compatibility (PS) -6590 + (NN) -1912 + (LL) 972
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -70622.0 ( -181.55 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: