Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVENAADCAAVGTLISSCTEFVNYGY--PDPI-----PGSSCCDAMTVIGTYSDSSEKRKWLCNCFMDLIN-VY---N---------S-N--------ATAISTLSGFCGVVLGFTIDPNTDCNFIQ
1B1U Chain:A ((15-108))
------------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60538 for 417 contacts (-145.2/contact) +
2D Compatibility (PS) -6242 + (NN) 3461 + (LL) 1260
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -64209.0 ( -153.98 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: