Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSE-KKPRLISFNGRTFDIPVLKYRAMVHDVQAEYFHKAGD---KWNS-------YNQRYSSNWHCDLLESLSDF-GAFARVKMNEVCAVFNLPGKIG---VDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
| 3K59 Chain:A ((203-352)) | --------------------------------------------------------------------------------------------SRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLR--LGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSDNPWDRMDEIDRRFAE-DKPALATYNLKNCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28013 for 838 contacts (-33.4/contact) +
2D Compatibility (PS) -13880 + (NN) -2083 + (LL) 6428
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -42048.0 ( -50.18 by residue)
QMean score : 0.288
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