Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRSNILEITA-GLFVLVF-T----IFLAFF-AIN----------KLSDIKKSYKGCYKIYGF-----FSNANGIEVGDSVKISGVNIGSITGISL-DKATYVA--RLDMCISKDIKLPIDSSALI-TSSGVVG----------SKFVNISPGSGIKLISNGGKIEYTQSEANVGGIID-----KI-LNMFSK------
3P06 Chain:A ((1-194))
----NGVELSAVGVLLPVLMDSGRRISGGAFMAVKGDLSEHIKNPKNTRIAQTVAGG-TIYGLSEMVNIDEAEKLPIKGAITVLPVVQATATSILVPDNQPQLAFNSWEAAACAADTLESQQTPFLMVTGAVESGNLSPNLLAVQKQLLVAKPAGIGLAANSDRALKVVTLEQLRQVVGDKPWRKPMVTFSSGKNVAQA
General information:
TITO was launched using:
RESULT:
Template:
3P06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96162 for 1107 contacts (-86.9/contact) +
2D Compatibility (PS) -15993 + (NN) -4668 + (LL) 492
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -124181.0 ( -112.18 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_3P06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P06-query.scw
PDB file :
Tito_Scwrl_3P06.pdb
: