Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTDYNINLTDSALKKIHSLVE-------QEEDKSSILRVAVSGGGCSGFK-YNFLMDQIDKNLSLSDDDDDDEFDDEDDDDDESEDYRSRSSFSRKSKDIVINDKDGNPVLMV-DNCSVKFLNNSIIDYTENLSGSGFQVKNALAKSQCGCGNSFSV
4Q7O Chain:A ((4-136))
MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKA---------------PSIYFSVGDDFNPEELIIPINLAYHYFNIAISDFLIAH----PEYQKKCKEIQ----KTY--
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6473 for 845 contacts (7.7/contact) +
2D Compatibility (PS) -13201 + (NN) -6569 + (LL) -104
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -22101.0 ( -26.16 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: