Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MFLKVFKSIFLFLVSILFVCPILSLVSILFTESTNSEWVISTLFPEYILNTLILMIGVGSISFIFGVIPAWLTTFFSFPGSRIFEVALFFPISIPGYIISFVYVNSLEFSGPTQSLLREIFHWGKGDYWFPEIKSLGGGILVMGFSLYTYVYILVRSNLKNVSNSVTVASTLGFSSLQSLFSVVIPSIRPSIIAGISLVLMEVITDFGTPQFLAIDTFTTGIYRTWFLLHDKYSAAVLAVAELVFITALIAVEKILQKKEISYSAINTNSDYHNKRSISGAIPLVFAYAMCILPILVGFALPIIPLIYWSIEKGFFIYGARFYNIIANSIGLSFITAMISVSIAIMIGCTARKNKVINNIARLISLGYAIPNAVIAISIIIFLSKISSFITQYFTEISLVG--TVGALIYSYLFRFFAISFKAIESGLKKTPNEIEWIAYTMGHGPISTCLNIHIPLIKKSILSGFLLVFMDTIKELTATLIIRPFNFETISTRIYELVSDERYREAAPFSLMIVITGLISTIILFKLDDENKK |
| 4P5F Chain:A ((8-374)) | LTPTEAAVLRELRLH-------RPQLPLDTLLFTDPNKD----------------------------------------------------------PDDVVTYTIAKQLQADG---------------------------------FLRLTDVVV-----------------TLGDADMRSQRAQLAKGVFDRL--ALPDVRVARGQDYPMTSTQAREHSK----------FLAEGAALRAAPDAVHTDGVRAMCERLATS-------------------PHKLGMVVIAGMTDASALLAEAGDLVREKVASITIMGGIDPAR------DADGL--------------VQPDTRAYNNATDIHAARALYRRAQQLGIPLRILTKEAAYKAAVPPAFYEGIARNGHPVGEYLRDVQKNALKGLWEGIQANLIPGLD-TAWFFRTFVAGALS--FDAIWPQVTK--LNLYDPLTLLAALPGTARLLFQPTPMHREGASPVEHVGHAEVVR--PEKARLLLSALAKAALV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -435673 for 3155 contacts (-138.1/contact) +
2D Compatibility (PS) -35666 + (NN) 1372 + (LL) 14588
1D Compatibility (HY) 0 + (ID) 3200
Total energy: -458579.0 ( -145.35 by residue)
QMean score : 0.232
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