Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGERINKKTSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSPYGCHDDNLIKNTNQLNMCSILWTVDSLDWQGDKPEILVDRVV----GNV-HNGAIILFHDHDNKSNTVE-ALPQIIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
| 2Y8U Chain:A ((24-225)) | ----------------------------------------------QVITQCTTPNTIALTFDDGPSE-YTPQLLDLLSRYSARATFFVLGDAAA-QNPGLLQRMRDEGHQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPAYMRPPYLETNELVLQVMRDLDYRVISASVDTKDYENQDADAIINTSFQLFLDQLDAGGNIVLAHDIH--YWTVASLAERMLQEVNARGLIATTVGDCLGDGEIAWYH------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80454 for 1660 contacts (-48.5/contact) +
2D Compatibility (PS) -20223 + (NN) -4882 + (LL) 3016
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -113643.0 ( -68.46 by residue)
QMean score : 0.437
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