Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMVKGILCDWLGVTELQESQKIDAEQFQRIFSALKK-WQEAQK--VNTEQFEKVFS-------ALEEKIGTEQFQSMQEYLNGLQ-KKFTGLEEKAGTLI-ETVGEQEKIMLTCCIIAS-VI-TLAA-ISFITFCIYQGVKSGRER-QRSL-SDISAQNLMNQTHQAQNFM
2G3V Chain:A ((22-182))
-----------KLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRDL
General information:
TITO was launched using:
RESULT:
Template:
2G3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17577 for 865 contacts (-20.3/contact) +
2D Compatibility (PS) -15108 + (NN) -3389 + (LL) 1080
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -41994.0 ( -48.55 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_2G3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G3V-query.scw
PDB file :
Tito_Scwrl_2G3V.pdb
: