Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIISDKVRQILSYYESENPGVRANLTRILMHGKLGGTGKLVILPVDQGFEHGPIKSFEVNPHAYDPHYHFQLAIDSGVSAYAAPLGMIEAGASTYAGMLPHILKLNSSNSLHSKSLTSDQAVTASVKDALRLGCTAVGFTIYPGSAKCFDMIEEARKIIAEAKSYGLAVVLWSYPRGEGISKEGETAVDVIAYAAHIAALLGANIIKVKLPTNHLEKEKIEAGNIKSLSKRIEYVKKSCFAGKRIVVFSGG-ESKSVNDIYNEAKEIKQGGGNGSIIGRNTFQRKKEEALSMLKDIMDIYT
2YCE Chain:F ((3-238))-----------------------NLTEKFLR-IFARRGKSIILAYDHGIEHGP-ADFMDNPDSADPEYILRLARDAGFDGVVFQRGIAE---KYYDGSVPLILKLNGKTTLYNGEPVS--VANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSFPRGGKVVN--ETAPEIVAYAARIALELGSDAMKIKY-----------TGDPKTFSWAVK------VAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARALAELVY--


General information:
TITO was launched using:
RESULT:

Template: 2YCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141284 for 2068 contacts (-68.3/contact) +
2D Compatibility (PS) -26531 + (NN) -16117 + (LL) 3176
1D Compatibility (HY) -16000 + (ID) 4650
Total energy: -201406.0 ( -97.39 by residue)
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_2YCE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCE-query.scw
PDB file : Tito_Scwrl_2YCE.pdb: