Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAHCYIKKLKLSNFRNH-----LNFELDSDDSSVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPINLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSIRCQAWITDVDQNNFGNYIDYFKTIEL |
1W1W Chain:C ((7-49)) | ---------LELSNFKSYRGVTKVGF---GESNFTSIIGPNGSGKSNMMDAISFVLGVRSLKDLIYRGPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYKKEYEELKEKIKILNQFLKIKKKRKELFEKTFDYVSDHLDAIYRELTGNASLTIEDEDEPFNAGIKYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDALVGVYRQQQENSSKIITLDLSNY--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12370 for 180 contacts (-68.7/contact) +
2D Compatibility (PS) -4254 + (NN) -1485 + (LL) 2904
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -19655.0 ( -109.19 by residue)
QMean score : 0.564
|
|
|