Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGD----FLHAPDIYMEKIAIGKDLPIGVVSLKNSVE---KNFD----NLAQAKKCEVNDL---TVTILKRERHNN----LILKIRKLGARVKLIDDGDIAAIVS-LINGSHDIYIGIG-GAPEGVLAAAAL-SSIGGQMEGRLIFDTHQSKERAKILNIDDLEKIYSIKDMVKGESVFIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
| 3B8B Chain:A ((59-264)) | --------------------------PLTIADRKAHEAIVAILNET--P-FPVLSEEGK-MDY--------AVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVMGVIYVP--VKKELYFAVEGT-GAY-KCSGIVGLEDEGVTLQQMIEKSERMPLADARDHFIAVASRSHLTPETETYIADLKKKHGNVELISSGS-SIKICLVAEGKADVYPRFAPTMEWDTAAGHAIARAAGMEVYQAGKEEPLRYNKEDLLNPWFIVEAKRE------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52168 for 1347 contacts (-38.7/contact) +
2D Compatibility (PS) -20139 + (NN) -12860 + (LL) 7936
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -83231.0 ( -61.79 by residue)
QMean score : 0.323
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