Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIVIVGLQWGDEGKGKIVDYLSENADTVVRFQGGNNAGHTIV-VDDEVYKLNLLPSAVLRTGKISIIGNGVALDPYALISEIESLRVKGMDINPNNLMVSESCPLILSVHKEKEKLFEDLNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNKRLDTLLNYHNAIRKGLSYRVIKKEEMLREIEEIAEKIIPYRKPVWKILNDFVKEGKKIIFEGAQGTFLDIDHGTYPFVTSSNTIASQVMTGSGLSSNAY--VIGVAKAYTTRVGNGPFPTEQRNEVGNSLFTIGKELGTVSNRKRRCGWFDAVLVRQAVQLSGVSSIILTKLDVLDSFDKIKICTGY-QYSGKIYDYLPASRSIQEELEPIYEEFPGWKENTQGEKLAEKLPVNLIKYVKRVEELIGIPIHLISAGPKREDVIKLKDFKFSESVLVSY |
| 1DJ3 Chain:B ((23-440)) | -----VLGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILHEGTLCVVGNGAVIHVPGFFGEIDGLQSNGVSCD-GRILVSDRAHLLFDLHQTVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFEDAAARFEGFKYSKGMLKEEVERYKKFAERLEPFIADTVHVLNESIRQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTELLGEEGDVLRKAGMEFGTTTGRPRRCGWLDIVALKYCCDINGFSSLNLTKLDVLSGLPEIKLGVSYNQMDGEKLQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSELPQAARRYVERIEELAGVPVHYIGVGPGRDALIYK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172343 for 3543 contacts (-48.6/contact) +
2D Compatibility (PS) -44744 + (NN) -15903 + (LL) 1468
1D Compatibility (HY) -32000 + (ID) 8450
Total energy: -271972.0 ( -76.76 by residue)
QMean score : 0.486
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