Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MFIGNRNRNKVERAISEI-RRGLPIIIYDKSNYLLV---AAAETLEKDLFNQYGL-------ISGKIY-VILPSS--------KVTCISQNVEHSSKRLLINNFD---ELFHLVNCSKEDHTK------ELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGW--CEKSDVIALDVLFINNFQQNQDIYEVCKTP---------LFLKQTQKVNI---IS--------YRTCNGRKEHYAIIIGNPGKNSEPLVRV------HSSCYTGDLL--DS----------------LSCDCRSQ-LHQAIQIMTDSGNGI----ILYLMQDGRGIGLTNKLRAYDMQRKY--NLDTVDANRILGF----EDDERSFAVAAEMLKKLGIKKIQLLTNNGR--KLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF----- |
| 4OPU Chain:A ((2-453)) | MKELKYDVLIIGGG--FAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQTVWTVNHEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNE------YGAKQASLDIFRRFLQKLSNDDINYGMKKKIIKEEDLLEASEKGDLHLSVADKAMRVISGLGRPSLLFKLKAVAESMKKIKELYLNYPR-SPSSLGSWRREVDNVLTEFNKSLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64915 for 2556 contacts (-25.4/contact) +
2D Compatibility (PS) -36933 + (NN) -4149 + (LL) -176
1D Compatibility (HY) -13200 + (ID) 3500
Total energy: -122873.0 ( -48.07 by residue)
QMean score : 0.193
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