Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MNMYRV---LLVLALLTSSNLNALINYSKPISVDSRIKTFVYSPNEVFTVIFSQGYYSYIEFAEGEKVKNIAVGDASSWRISP---------YDNKLLIMPFEVSSRTNMIITTTK-----------KRNYIFDLISRP-NYDKYPDTDAEKVSHDYSAEKDISYVVRFYYPKEEDEFDIDLDEISAPTQMQYVVDRPEKIIQENDTKYNYTY-IDEGGNADMIPIELFDDGYLTYFKFRDSNKIPQIFAKDGKTRLPCKRLLFDGYVIIKGVHKKLFMRYENDEVEIINRSL |
| 3LRV Chain:A ((11-343)) | APKWPILKNLELLQAQNYSRNIKTFPYKELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE-AKIKEVKFADNGYWMVVECDQ---TVVCFDLRKDVGTLAYPTYTIGTVTYDIDDSGK-NMIAYSN-ESNSLTIYKF---DKKTKNWTKDEESALCLAD--FTDMDVVCGDGGIAAILKTNDSFNIVALTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85338 for 1768 contacts (-48.3/contact) +
2D Compatibility (PS) -27809 + (NN) -6725 + (LL) 1148
1D Compatibility (HY) -10800 + (ID) 2200
Total energy: -131724.0 ( -74.50 by residue)
QMean score : 0.311
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