Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAVVKELAHP--LFSAAGIDDNWIRVFIINDNSINAFVINNNSIFIHLGLLQYSTEPYALLSILAHEIAHISAGHISQMSSA--VGYFQSIAIVSYMVGLISTIIINPQIASAILLSGMTLSSRLFFNYSQEQESVADSYALKYLDESGYDNLGMKEVFDYFRGIEHENAEGYFRTHPLSSKRIFAVQNYKVKNEVKPILVDKLLRFKRMVAKLDSFFSPIHVLSNKYEDNSEYVSAVIYYRQGKIKKAIAKVNSLIQESSNDPYLYELKAEMLYKTGNLNEAVKMYEESLK------YLSEKNSYLVKLALSHAL-----LLYGDIKKAIFHLEQIVSVEPNNAFVWKHLGIAYK--CDANIAMHYFALTKKACIEGNLKQ--FVKYAELAVRNLPKDSPYLLQIEDMKRFNE------------------------------------------- |
| 4G1T Chain:A ((6-448)) | KNSLESSLRQLKCHFTWNLMEGENSLDDFEDKVFYRTEFQNKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS-------PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLN-------------------------PDNQYLKVLLALKLHKMRGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGDSEALHVLAFLQELNEKMQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101157 for 2624 contacts (-38.6/contact) +
2D Compatibility (PS) -38435 + (NN) -16195 + (LL) 2848
1D Compatibility (HY) 0 + (ID) 2200
Total energy: -155139.0 ( -59.12 by residue)
QMean score : 0.334
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