Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNNLRDFIEALEKKRDLIRIKKEVSTI-LEMTEIHRRVSLNKGPAIIFEN------VVTENGKSVIPVLVNLFGTI-ERIAFGLNISP---GELRDLG--------KLLAFLQSPEPPKN-LKDVIKMF--PLLKVVLSM----RSKIVNKAPCQEVVLTGDD---VDLSLLPIQTCW-PNEPAPLITWPIVITKGPTEDKQDNFNLGIYRMQVMDKKTTLMRWLAHRGGASHHKRWKENGRSI---------KFPAAAVIGSDPA--TLIAAVTPVPETLSEYQFAGLLRKKPLELVNCKTIS----LQVPAHAEIVLEGYVSLDSYRNEGPYGDHTGYYNSVEQFP--EFNITAITMRKNPIYLSTFTGKPPD----EPSILGEALNEIFVPILINQFPEIVDFYLPPE--GCSYRIAVVSV------KKSYPGHAKRII---MGIFSFLKQFL----------YT------KFIIVV--DDDINIRDW-KEVMWAISTRMDPVRDTVMIENAPIDYLDFASPESGLGGKMGFDATNKMPPETKREWGKKIEMSEEI---VKKVTEKWDEYGLTDD--------------- |
| 4Q86 Chain:A ((2-583)) | TQTFIPGKDAALED--SIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPD------FGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPA-EDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYY---RCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52231 for 3609 contacts (-14.5/contact) +
2D Compatibility (PS) -49683 + (NN) -903 + (LL) 1112
1D Compatibility (HY) -7600 + (ID) 4100
Total energy: -113405.0 ( -31.42 by residue)
QMean score : 0.082
|
|
|