Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMIFRLLFLLVFISVNSYAVIKQDLSNNHYIQKINEITSKELLLPLPDDKLLGDSKAPILMIEYASLTCYHCSLFHREVFPEIKKKYIDTGKMLYIFRHFPLDYRG---------------------------------------------------LKAAMLSYCYEKQEDYFNFNKAVFNSIDSWNYSNL-SDLTVLQKVAALSNLKQDTFNRCINDK-EVMDKIINDKSLAINKLGIMATPIFFIKLNNDRSHTEPNKIRHEGYKAQEYFTNVIDRLYEKAIVK |
3GL5 Chain:A ((2-214)) | ---------------------------------------------------------HMRVEIWSDIACPWCYVGKARF-EKALAAFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLGAQAAAEGLAYRTRDRDHGSTFDLHRLLHLAKERGRHEALLDAFYRGNFAD-ERSVFNDDERLVELAVGAGLDAEEVRAVLADPAAYADEVRAD-EREAAQLGATGVPFFVLDRAYG----------VSGAQPAEVFTQALTQAWGERTPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107843 for 1226 contacts (-88.0/contact) +
2D Compatibility (PS) -16528 + (NN) -5113 + (LL) 5304
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -128530.0 ( -104.84 by residue)
QMean score : 0.461
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