Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGSPVILAPMSGVTDYPFRSIVKKLGASL-LVSEMIASRAMIMQTRQS-MQKAKVDELTAVQLAGCEPDIMAEAAKLNEDMGAKIIDINFGCPVKKVVNGYAGSALMRNEKKAAEIIEAVVKAVNVPVTVKIRTGWNNE--NRNAPRLAKIAEDLGAKMITVHGRTRAQLYNG--QADWKFIRNVKEQV-KIPVIVNGDIKSLNDIQNALKESRADGVMIGRGAYGRPWLINQAINFLSGSEVSEPTASEKLSIILEHYDNILEYYGNDAGIKIARKHIGWYSSGFKNSSEFRVRVNNMTDSMEVKENIVSFFSQV |
| 3B0P Chain:A ((2-315)) | -LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSAL-----IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLP-RRPSRLEVARRMRAYLEEEVLKGT---PPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167227 for 2520 contacts (-66.4/contact) +
2D Compatibility (PS) -32188 + (NN) -12863 + (LL) 600
1D Compatibility (HY) -11200 + (ID) 3850
Total energy: -226728.0 ( -89.97 by residue)
QMean score : 0.527
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