Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFVRLLSSILVALSVIFLGYCYFTKKGIFAPAVIHNAEVKIGGDFSLINQDGQVIRSNDFKDKYMMIFFGFSSCKKICPMNLGIISETLAKLDEKTSDKLQTFFITVDPECDSTEKLKEFQQQFDYR---IQMLTG-ERKKIDEVIANYKVYTSKVGGEEG-INHSSIIYLIGPGGKYVTHFAADLNSDESQSDKIAAEIKKYINEL
3ME7 Chain:A ((6-161))
-----------------------------------------YVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTP-GKDFWVITFTFDPK-DTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTA---GNDFIHPNVVVVLSPELQIKDYIYGVNY----NYLEFVNALRLARGEG
General information:
TITO was launched using:
RESULT:
Template:
3ME7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88148 for 1160 contacts (-76.0/contact) +
2D Compatibility (PS) -16979 + (NN) -11081 + (LL) 4096
1D Compatibility (HY) -11200 + (ID) 1050
Total energy: -124362.0 ( -107.21 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3ME7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ME7-query.scw
PDB file :
Tito_Scwrl_3ME7.pdb
: