Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNNNDDLHYCSFCNKAQNEVDKLITNSSDGLKVFICNECIELSHKAISQKKGGSFNSDYMSDVKLLLKKPEDIKIFLSKHVVGQEHAQHVLSVAMYNHCQSMAQFNAISDVEIEKSNVMLIGPTGSGKTLLAKTLAKVSDVPFAMADATTLTEAGYVGDDVESVLSRLLQAANYDVAKAQRGIVFIDEIDKITRKSESTSITRDVSGEGVQQALLKIMEGTVAYVPPQGGRKHPQQEFIQVDTNNILFICGGAFEGLNKIIEAR-KKGTSVGFGADISQSKEQKKKNTLHDVQPEDLIKFGLIPEFVGRVPITAVLDELDHEDLVHVLIEPRNALIKQYKALLAFSKVNLEFSDEAISAIAEKAMSYKTGARMLRAILESLLLDVMYTAGNGGFEGSTIVITKEMVELGKAVINHNNKGNVITVND
4I4L Chain:B ((3-324))-------------------------------------------------------------------LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDT---VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTL---GYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRK--------DVSGEGVQQALLKLIEGT----------------FLQVDTSKILFICGGAFAGLDKVISHRVET---------------ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY-----------


General information:
TITO was launched using:
RESULT:

Template: 4I4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -213277 for 2174 contacts (-98.1/contact) +
2D Compatibility (PS) -29606 + (NN) -12947 + (LL) 4564
1D Compatibility (HY) -33600 + (ID) 8700
Total energy: -293566.0 ( -135.03 by residue)
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_4I4L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I4L-query.scw
PDB file : Tito_Scwrl_4I4L.pdb: