Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLK-DFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYARGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDISNESLIVTGKGDKQRQVFILPVVKMFIQEYVKACPYLSVNNEAQHLFVGVRGKKLGRTYVANRLQKIRRMLNLPEIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETTQVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
| 2KKP Chain:A ((7-107)) | ITVEQWLNRWLTDYA-KPHLRQSTWESYETVLRLHVIPTLGSI--------PLKKLQPADIQRLYASKLESGLSPTRVRYIHVVLHEAMSQARESGLLLQNPTEAAKPPRHPLEHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48724 for 664 contacts (-73.4/contact) +
2D Compatibility (PS) -10051 + (NN) 1830 + (LL) 21508
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -39737.0 ( -59.84 by residue)
QMean score : 0.486
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