Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYF-LPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIGIVSTFFRGLSNYDDKNSGLRFFLV-TLNDEIIGTCGFYIQDSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHVVAHCM---KPSVNLYKRLGFQILGNLYLYTSSA |
2FT0 Chain:A ((14-235)) | -----VRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRVQAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNA-----TDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYWLYR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106268 for 1650 contacts (-64.4/contact) +
2D Compatibility (PS) -22596 + (NN) 2779 + (LL) 876
1D Compatibility (HY) 2000 + (ID) 1300
Total energy: -124509.0 ( -75.46 by residue)
QMean score : 0.381
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