Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MNIHSDSPRQCLEEIIKSASAKFNESIDIAVNL-GIDSRKSEEQVRGTVVLPKGIGKDIKVAVFTQGKHLLEAEKAGANIVGGEDLVQEIKKGKK--LDVDWCITTPDFIAKITP-IAKILGAKGLMPNPKFGTM--TSNVAEAIKTIKSGQIKFRTDKNGIIHGKLGNIKFSVDDLLKNLKAFLKVIKSNKPISVKGV-YFKSVFLNSTMGKAYKMSKVEDII
487D Chain:H ((1-224))
KRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLG-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILD---GWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGF--NIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKG-TFLRSVYVTTTMGPSVRINPHS---
General information:
TITO was launched using:
RESULT:
Template:
487D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120978 for 1605 contacts (-75.4/contact) +
2D Compatibility (PS) -22621 + (NN) -12372 + (LL) 332
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -173189.0 ( -107.91 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_487D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-487D-query.scw
PDB file :
Tito_Scwrl_487D.pdb
: