Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTTEGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWI-GATPVYEVEKLNNHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDSNNSIVALDCGIMGRIDRETCYYVIEILKGFL---NRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPEINVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
4K6N Chain:A ((32-383)) | -------PNFEVLATFRYDPGFARQSASKKE------------------IFETPDPRLGLRDEDIRQQIINE---------DYSSYLRVREVNSGGD---------------LLENIQHPDAW-----KHDCKTIVCQRVEDMLQVIYERFFLLDEQYQRIRIALSYFK-IDFSTSLNDLLKLLVENLI----------NCKEGNSEYHEKIQKMINERQCYKMRVLVSKTGDIRIEAIPMPMEPILKLTTDY--------------------------------------DSVSTYFIKTMLNGFLIDSTINWDVVV-------SSEPLNASAFTSFKTTSRDHYARARVRMQTAINNLRGSEPTSSVS---QCEILFSNKSGLLMEGS------ITNVAVIQKD--PNGSKKYVTP--RLATGCLCGTMRHYLLR---LGLI---EEGDIDIGSLTVGNEVLLFNGVMGCIKGTVKTKY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136520 for 2783 contacts (-49.1/contact) +
2D Compatibility (PS) -35979 + (NN) 6282 + (LL) 8904
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -173463.0 ( -62.33 by residue)
QMean score : 0.213
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