Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNYFALFKIEPAFNISLDELEKKYIELSKTDINER-----QSQNMENINKAYQVLKSPLKRAEHLLNLFGVRSQEDQHNFEILNESMEIREYLLDCNNLQLASGMIDEKIKDCIKNLTNNFAVKNFDEAAMQVLRLKYLYKSFEEIKNETNSNF
2CTP Chain:A ((6-71))
-SGDYYEILGVSRG--ASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPSSG--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CTP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6227 for 380 contacts (-16.4/contact) +
2D Compatibility (PS) -6521 + (NN) -3652 + (LL) 6852
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -12698.0 ( -33.42 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_2CTP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CTP-query.scw
PDB file :
Tito_Scwrl_2CTP.pdb
: