Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNELRKLSIAQMHNGLKQRSFSAVELIEVHINAVEN--EKLNAFITKTPEIAIKAAKTADERFSQQKDSTISPLMGIPVGVKDLFCTKGVKTTACSKMLENFIPTYESTVSDLLLKSGAAMLGKLNMDEFAMGSANINSYFGPVENVWVRKSDGEKVVPGGSSGGSAASVAGFLCAGALGSDTGGSVRQPAAYCGVVGAKPTYGRCSRFGMIAFASSLDQAGVITRSVSDSALMLETICGYDNKDSTSSERPVPRFSNFINGDIKGRRIGIPKEYRMDGISEEIIYHWEKVSSDLKENGAEVVDITLPHTKYAIPVYYLICSAEASSNLARYDGVRYGLRVN--ADILEEMYSLTRAEGFGKEVKRRILIGAYALSSGHYNEYYEKAQCIRALIRNDFIKAFEKIDYILVPSAPTEAFGLNEK-PDPLIMCINDVFTVPASLAGLPAISVPVGLSNEGLPLALQVIGNYYDEAGMLNVASVIEQNCSRIIKLNS |
3H0M Chain:D ((2-475)) | ---LWKKSLSELRELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKER--------ELPLFGIPIAVKDNILVEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPW----DLERV-PGGSSGGSAASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVALVLEVISGWDEKDSTSAKVPVPEWSEEVKKEVKGLKIGLPKEFFEYELQPQVKEAFENFIKELEKEGFEIKEVSLPHVKYSIPTYYIIAPSEASSNLARYDGVRYGYRAKEYKDIF-EMYARTRDEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQKVRRLITNDFLKAFEEVDVIASPTTPTLPFKFGERLENPIEMYLSDILTVPANLAGLPAISIPIAWKD-GLPVGGQLIGKHWDETTLLQISYLWEQKFKHYEKIPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234728 for 4574 contacts (-51.3/contact) +
2D Compatibility (PS) -50046 + (NN) -11640 + (LL) 1316
1D Compatibility (HY) -39600 + (ID) 11850
Total energy: -346548.0 ( -75.76 by residue)
QMean score : 0.486
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