Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDDKKTTIEEEKGILGWIEYRLPIFSFLKHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDHAFNSVERIMRDVNYGWLIRYTHAVGASLFFMVVYVHMMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGATVITNLFSAVPLVGNKIVMWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHIIALHRFGSGNPSGVEVK------SGKDTIPLYPYYIVKDCITFGLFFIVLFAFVFYAPNYLGHPSNYIEADSMVTPVHIVPEWYFLPFYAMLRS------------------IPDKLTGVLTMFGSILVWFLLPWLDKAKVKSGAYRPLFKKFFLVFAVNFAFLAWLGGQEVKEPYITLSRLSTLYYFAYFMVVLPLLSKYEKPEELPKTISDSVPEMK |
| 2QJK Chain:P ((8-425)) | ---------EPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -322892 for 3021 contacts (-106.9/contact) +
2D Compatibility (PS) -40469 + (NN) -19590 + (LL) 664
1D Compatibility (HY) -60000 + (ID) 11450
Total energy: -453737.0 ( -150.19 by residue)
QMean score : 0.397
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