Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPIICALDTQDLNEAISLANTLRDKVGMIKLGLEFFAAHGPSGVREVAKCNVPTFLDLKLHDIPNTVAKTVEAIKVLNIEILTLHISGGTKMLEEALSIVKDTK---TKLIGVTVLTSMSNEDLSELG----IAREVKSQVILFAKLAKKVGLHGIVCSALEAQEVYQECGKDFKIITSGIRVGF-GHDDQKRTATPKEAINSGADYIVIGRPITKSNSPANSAELILKSLS
1DBT Chain:A ((3-235))
NNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWE
General information:
TITO was launched using:
RESULT:
Template:
1DBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160323 for 1912 contacts (-83.9/contact) +
2D Compatibility (PS) -24624 + (NN) -11484 + (LL) 0
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -214481.0 ( -112.18 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1DBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DBT-query.scw
PDB file :
Tito_Scwrl_1DBT.pdb
: