Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNTLQLENYRNY-DEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQH--KVQTFVTTTSVDGIDHEIMNNA-KLYRINQ----GEIIK--- |
| 1E69 Chain:A ((1-1164)) | MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAI-KWVFGEKFDMIFAGSENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTGLGVDFYSIVGQGQIDRIV--------------------------------------------------------------------------------------------------NAYQRVNESFNRFISLLFFGGEGRLEISIRKPGRRDQKLSL----------LSGGEKALVGLALLFALME-----IKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITH----NKIVMEAADLLHGVTMVNGVSAIVPVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38243 for 1928 contacts (-19.8/contact) +
2D Compatibility (PS) -26823 + (NN) -2964 + (LL) 9776
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -73804.0 ( -38.28 by residue)
QMean score : 0.321
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