Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRMYEQNQMPHNNEAEQSVLGSIIIDPELINTTQEVLL-PESFYRGAHQHIFRAMMHLNEDNKEIDVVTLMDQLSTEGTLNEAGGPQYLAELSTNVPTTRNVQYYTDIVSKHALKRRLIQTADSIANDGYNDELELDAILSDAERRILELSSSRESDGFKDIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTAFALNIAQKVATHEDMYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWSRFTIAVGKLSRTKIFIDDTPGIRINDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRASDNRQQEVSEISRTLKALARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNRGGDEDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMKQYNKFTDIDYAHADMM |
2Q6T Chain:C ((7-440)) | ----------PHSLEAEQSVLGSILLDSDVMDEVEGLLPSPEAFYAEAHRKIYAAMQALRSQGRPVDLVTLSEELSRRGQLEEVGGTAYLLQLSEATPTAAYAEHYARIVAEKWTLRRLIQAAGEAMRLAYEEAGSLDEILDTAGKKILEVALTKTDTEARPMRELVHETFEHI--------------TGFKELDQLIGTLGPGSLNIIAARPAMGKTAFALTIAQNAALKEGV-GVGIYSLEMPAAQLTLRMMCSEARIDMN----------DFSRLVDVASRLSEAPIYIDDTPDLTLMEVRARARRLVSQNQVGLIIIDYLQLMSGP------NRQQEIAAISRGLKALARELGIPIIALSQLSRAVEARPNKRPMLSDLRESGSIEQDADLVMFIYRDEYYN--------------PHS-EKAGIAEIIVGKQRNGPTGTVELQFHASHVRFNDL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186552 for 3092 contacts (-60.3/contact) +
2D Compatibility (PS) -43697 + (NN) -20220 + (LL) 1788
1D Compatibility (HY) -36800 + (ID) 9750
Total energy: -295231.0 ( -95.48 by residue)
QMean score : 0.540
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