Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFFSILPIYDSGGY-LEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLPSLTVQVAMAGAMLIGLHH-RICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENF-WNGI--------QEWTERHGYI-VD--VSKRIPF |
| 4EBJ Chain:A ((15-272)) | -------ENLYFQGVQHTIARWVDRLREEY-ADAVAILLKGSYARGDAATWSDIDFDVLVSTQDVEDYRTWIEPVGDRLVHISAAVEWVTGWERDTV----DPSSWSYGLPTQETTRLMWAINDETRRRLDRPYKTHPAAEPEVEDTVEALGKIRNAIARGDDLGVYQSAQTVAKLVPTLLIPINPPVTVSHARQAIEAILAFPRVPVGFAADWLTCLGLVEERSARSTAAAAERMVRGVLEMLPTDPDLLGEDIARLMNAGLLEKYVQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108414 for 1807 contacts (-60.0/contact) +
2D Compatibility (PS) -25608 + (NN) -6049 + (LL) 256
1D Compatibility (HY) 400 + (ID) 1800
Total energy: -141215.0 ( -78.15 by residue)
QMean score : 0.324
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