Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTTTQELKQYITRLFQLSNNETWECEALEEAAENILPERFINDSPLAHLTLETYTYYNNELHDLSIY-----PFLMYANNQLISVGYLNHFDMDFLYLTDTKNTIIDERHLLREGGTHHE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4Q9T Chain:A ((12-446)) | TKILTETEKYSVTKL--STDLSFLPFEGLVDTA---LQKALVND--LDHIYIWNYNSIQKDTPICKISLHSSPPICLFTSS-INGICIINKKNSQFLYFEDI-STINNLAHVLDLKLKDNENITSTINCEPSGIIIATSLGRVLFITIKDSTGKPKLELKQQLIKPQNSFFFRNLDSSKEIISLKKGPIVGKGERLLYITTRGGSLQIWQLSINSKSFKRLEINIYEHVLDSLQDLYPFAHGTLAFLDSHPIYSDTSSAHLTLASISNGNEIYYLMITVILDEKTNSFQIFSIYKLNTYFTKSTVDLNHKPQLFIPNALDSIVSPTLSVYVLFNNAVVMTQISSKLDSSFPLRRKWEDIIRFNKDVEIIGSGYSTDSIYVICKDMGVLKIASH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19251 for 612 contacts (-31.5/contact) +
2D Compatibility (PS) -10714 + (NN) 849 + (LL) 496
1D Compatibility (HY) -7600 + (ID) 1300
Total energy: -37520.0 ( -61.31 by residue)
QMean score : 0.165
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