Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYLHQHPELSFHEDETAKYIAEFYKGKDVEVET-NV-GPRGIKVTIDSGKPGKTLAIRADFDALPITEDTGLSFASQNKGVMHACGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAK--AMIENGVLDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHGSS-PHMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKG-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYN-DDYPALYNDPEFTEYVAKTLKEANLDFGVE--MCEPQPPSEDFAYYAKERPSA--FIYTGAAVEDGEIYPHHHP--KFNI----SEKSLLISAEAVGTVVLDYLKGDN |
| 3RAM Chain:A ((3-376)) | EKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAEYDALPGLG---HAC----GHNIIG------TASVLGA-IGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGN--E-TYKT--ID--TLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQH-IK--KDQRVHGVILDG-GKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEE----VGEAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRN-----LVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137558 for 3130 contacts (-43.9/contact) +
2D Compatibility (PS) -38954 + (NN) -19617 + (LL) 1336
1D Compatibility (HY) -11600 + (ID) 4000
Total energy: -210393.0 ( -67.22 by residue)
QMean score : 0.506
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