Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMA------------------LCTTPLQFVLVRLLQGLFGGVVDASSAFASAE-APAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSAL-------LMSIAVITFIVCIFGALKLIETTHMPKSQTPNINKGIRRSFQ--CLLCTQQTCRFIIVGVLANF-----AMYGMLTALSPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSAILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK |
| 4QIQ Chain:A ((7-470)) | SYIFSITLVATLGGLLFGYDTAVISGT--VESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGAS-TDIALLQTIIVGVINLTFTVLAIMTVDKFGR-----KPLQIIGALGMAIGMFSLGTAFYTQ-----APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274239 for 3267 contacts (-83.9/contact) +
2D Compatibility (PS) -40304 + (NN) 7309 + (LL) 1396
1D Compatibility (HY) -23600 + (ID) 3300
Total energy: -332738.0 ( -101.85 by residue)
QMean score : 0.246
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