Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAKQFLTEADISIQLVKEVRLVGKD-LDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL
3H7H Chain:B ((4-98))
MDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQMVPIKEMTDVLKVVKE------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33789 for 633 contacts (-53.4/contact) +
2D Compatibility (PS) -10117 + (NN) -3891 + (LL) 5912
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -43835.0 ( -69.25 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_3H7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H7H-query.scw
PDB file :
Tito_Scwrl_3H7H.pdb
: