Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGDFYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAEILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKLHKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAMNML-NATVEMDG----LKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAED--IHEEPIFIQTSPETQFESEVVVSELLGSEIMVHSTFQGMELISKL-DSRTQVMTNDKITLAFDMNKCHFFDEKTGNRIV
2YYZ Chain:A ((2-359))-PSIRVVNLKK-YFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPTNFLRDFSVSVENKQTILKRDDVIIKLPEPVDVKL-------KEVVVGIRPEHCRISRERV------ENSIPGVVYVVEPLGRDIIVNVKTEKGEIIKVFGDTGKAPQPGENVFLVPDLRKIHLFNPETEETIL


General information:
TITO was launched using:
RESULT:

Template: 2YYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203007 for 2731 contacts (-74.3/contact) +
2D Compatibility (PS) -38065 + (NN) -9070 + (LL) 972
1D Compatibility (HY) -37200 + (ID) 8100
Total energy: -294470.0 ( -107.82 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_2YYZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YYZ-query.scw
PDB file : Tito_Scwrl_2YYZ.pdb: