Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----M-TTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVDQLHELIAN-TDLNKLSYLNLDAF------QKRDILAAHYIAKSAIRTKNLDQMTKAK----------------------QRLESIYNSISNPLHSQN-N------------
1MW5 Chain:A ((3-164))
ETDLLMKVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSMEYWHALEYKGELN
General information:
TITO was launched using:
RESULT:
Template:
1MW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11238 for 661 contacts (-17.0/contact) +
2D Compatibility (PS) -12288 + (NN) -4703 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -32779.0 ( -49.59 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_1MW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MW5-query.scw
PDB file :
Tito_Scwrl_1MW5.pdb
: