Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASLKNKHFMIGLSLTFIVALFSFLAAKLPILDKVGALTIAILIAILYRHFRGYPEQYSSGITFSSKYLLRFAIILYGL------KLNIFDIIGQGSKLLAIDVGVVIFSIVMMLFV--NKLLHGDKNIALLLGVGTGVCGAAAIAAVAPIFKSREKDTAISIGIIALIGTIFSLIYTAIYAIFSMTTNVYGAWSGV---SLHEIAHVVLAGGFGGSDALKIALLGK-LGRVFLLIPLTIVLILIMRFRSSESSSKGRISIPYFLIGFVIMALVNTYVTIPSVLLNILNTISTICLLMAMVALGLNVAFKDLKNRALKPLMTIIITSICLSSLAFIVVHWLYS |
| 2E8X Chain:B ((4-340)) | NKMEAKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPT--------QEMYLNMVMNKTGGLFRLTLRLMEALSPSHGHSLVPFINLLGIIYQIRDDYLNLKDFQMSFAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLL---------RTSDKDIKLKLIQILEFDTNSLAYTKNFINQLVNMIKNDNENKYLPE------LLYIIDHLSEL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -315011 for 2263 contacts (-139.2/contact) +
2D Compatibility (PS) -30765 + (NN) -2594 + (LL) 3088
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -349432.0 ( -154.41 by residue)
QMean score : 0.259
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