Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
3HE5 Chain:B ((4-46))
------------------------AYLRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLENEVA----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13536 for 163 contacts (83.0/contact) +
2D Compatibility (PS) -4950 + (NN) -4891 + (LL) 3244
1D Compatibility (HY) -3200 + (ID) 750
Total energy: 2989.0 ( 18.34 by residue)
QMean score : 0.896
(partial model without unconserved sides chains):
PDB file :
Tito_3HE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HE5-query.scw
PDB file :
Tito_Scwrl_3HE5.pdb
: