Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEIDFDIAIIGAGPAGMTAAVYASRANLKTV----MIERGIP-GGQMANTEEVENFPGF-EMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE----YKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGK-VGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVT-KDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA |
| 3ITJ Chain:B ((20-337)) | --HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILY-NTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136984 for 2680 contacts (-51.1/contact) +
2D Compatibility (PS) -31949 + (NN) -4743 + (LL) 340
1D Compatibility (HY) -21200 + (ID) 6500
Total energy: -201036.0 ( -75.01 by residue)
QMean score : 0.434
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