Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGAD----VICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
3GX8 Chain:A ((18-87))
VVLFMKGTPEFPKCGFSRA------TIGLLGN-QGVDPA----KFAAYNVLEDPEL----REGIKEF--SEWPTIPQLYVNKEFIGG-------------------
General information:
TITO was launched using:
RESULT:
Template:
3GX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34151 for 409 contacts (-83.5/contact) +
2D Compatibility (PS) -6699 + (NN) 184 + (LL) 2596
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -40120.0 ( -98.09 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3GX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GX8-query.scw
PDB file :
Tito_Scwrl_3GX8.pdb
: