Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKP-EFYALAAGTKSDK--DVRM---KFPNHPQVNT-VYGEINDIDLDAQIVSVG------NSKIDYDELIIGLGCEDKYHNVPGAEE--YTHSIQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRILRNFPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGK--IYNC-DEPKDIDLVVWTAGIQPVE-VVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPH--------APSAQLAEVQGDQIADVLKKQWLNEPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG |
| 3ICS Chain:A ((36-353)) | SRKIVVVGGVAGGASVAARLRR-L-SEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE-KKPRHATVIGGGFIGVEMVENLRER--GIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQ-TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGH--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175286 for 2420 contacts (-72.4/contact) +
2D Compatibility (PS) -32484 + (NN) -19394 + (LL) 3900
1D Compatibility (HY) -15600 + (ID) 2700
Total energy: -241564.0 ( -99.82 by residue)
QMean score : 0.542
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