Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGEQFTQIKRPVSRLTEKVLGWLCWVMLLVLTVITMFIALVSFSNNTSIANLENTLNNNAFIQQLLAGNGYNTTQFVIWLQNGIWAIIVYFIVCLLISFLALISMNIRILSGFLFLISAIVTIPLVLLIVTLIIPILFFIIAMMLFIRKDKVEMVAPQYYEEYNGPIYDYREPVYERPQPKDDYYDVPKYEKELDKSNTVYDQEQERDKYDQFPKRAVESEYNHDERTEEEPSVLSRQAKYKQKSTEELGIEDDGYYAEPEVDPKELKAQQKREKAEIKAKKKEKRKAYNQRMKERRKNQPSAVSQRRMNFEERRQIYNNDISEERNSSEVKDKKEQE |
| 2K48 Chain:A ((1-107)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MHHHHHHGKPIPNPLLGLDSTENLYFQG-----IDPFTMSTLQELQENITAHEQQLVTARQKLKDAEKAVEV--------------DPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQKL------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 63690 for 548 contacts (116.2/contact) +
2D Compatibility (PS) -11808 + (NN) -4888 + (LL) 21260
1D Compatibility (HY) -800 + (ID) 750
Total energy: 66704.0 ( 121.72 by residue)
QMean score : 0.332
|
|
|