Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK
2FYZ Chain:B ((448-479))
-------------------------------------------------DISTELSKVNASLQNTVKYIKESNHQLQSVIV-------------
General information:
TITO was launched using:
RESULT:
Template:
2FYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4571 for 117 contacts (39.1/contact) +
2D Compatibility (PS) -3712 + (NN) -3442 + (LL) 5032
1D Compatibility (HY) -800 + (ID) 350
Total energy: 1299.0 ( 11.10 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2FYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FYZ-query.scw
PDB file :
Tito_Scwrl_2FYZ.pdb
: