Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDLNKKYLIDLHQHQNSSIEVLREFAEGNEVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN-DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE
2GPY Chain:A ((5-214))-EERLKHYLEKQIPARDQYIEQMEREAHEQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLF--------------------------QWLLEHPQYDTRIFPVGDGIAISIKR-


General information:
TITO was launched using:
RESULT:

Template: 2GPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112888 for 1421 contacts (-79.4/contact) +
2D Compatibility (PS) -20268 + (NN) -7554 + (LL) 2112
1D Compatibility (HY) -18800 + (ID) 3250
Total energy: -160648.0 ( -113.05 by residue)
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_2GPY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GPY-query.scw
PDB file : Tito_Scwrl_2GPY.pdb: