Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREEGIDCTFIAVKLPYGVQKDADEVDQALRFIEPDEI--VTVNIKPAVDQSVQSLKEAGIVLTDFQ---KGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS |
3FIU Chain:B ((6-246)) | ----------------DFSPKEYSQKLVNWLSDSCMNYP-AEGFVIGLSGGIDSAVAASLA-------VKTGLPTT--ALILPSDNNQHQDMQD-ALELIEMLNIEHYTISIQPAYEAFLASTQSFT------QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYMGYFTKFGDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLWQGQ---TDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRSHHKRKLALT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12454 for 1840 contacts (-6.8/contact) +
2D Compatibility (PS) -25097 + (NN) -9257 + (LL) 4280
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -62428.0 ( -33.93 by residue)
QMean score : 0.417
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