Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDDIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHH-------NELRESHKELKDKQDKVVDENLEQTKILNRIEERYQTQVDVAQKNEEKTLAQNKWLVGAIWALVTIVMIAVITASITALLP |
1M1J Chain:B ((96-156)) | ----KTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELHYN------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8889 for 205 contacts (43.4/contact) +
2D Compatibility (PS) -6062 + (NN) -6299 + (LL) 7320
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 1398.0 ( 6.82 by residue)
QMean score : 0.620
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